Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Gm44953-201ENSMUST00000208745 1286 ntBASIC17.6■□□□□ 0.41
Polr1aO35134 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Polr1aO35134 Gm6331-201ENSMUST00000217890 450 ntBASIC17.6■□□□□ 0.41
Polr1aO35134 AC169511.1-201ENSMUST00000227639 995 ntBASIC17.6■□□□□ 0.41
Polr1aO35134 Gm43365-201ENSMUST00000196522 2106 ntBASIC17.6■□□□□ 0.41
Polr1aO35134 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Polr1aO35134 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Polr1aO35134 Gm6170-201ENSMUST00000187672 1388 ntBASIC17.59■□□□□ 0.41
Polr1aO35134 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Polr1aO35134 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Polr1aO35134 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Polr1aO35134 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Polr1aO35134 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Polr1aO35134 Gm26368-201ENSMUST00000157826 118 ntBASIC17.59■□□□□ 0.41
Polr1aO35134 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Polr1aO35134 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Polr1aO35134 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Polr1aO35134 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC17.59■□□□□ 0.41
Polr1aO35134 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Polr1aO35134 AC138716.2-201ENSMUST00000226670 1016 ntBASIC17.59■□□□□ 0.41
Polr1aO35134 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Polr1aO35134 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Polr1aO35134 Gm44913-201ENSMUST00000208060 2990 ntBASIC17.59■□□□□ 0.41
Polr1aO35134 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Polr1aO35134 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Polr1aO35134 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Polr1aO35134 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC17.59■□□□□ 0.41
Polr1aO35134 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Polr1aO35134 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Polr1aO35134 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Polr1aO35134 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Polr1aO35134 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Polr1aO35134 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Polr1aO35134 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC17.58■□□□□ 0.41
Polr1aO35134 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Polr1aO35134 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC17.58■□□□□ 0.41
Polr1aO35134 Gm44498-201ENSMUST00000199509 111 ntBASIC17.58■□□□□ 0.41
Polr1aO35134 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC17.58■□□□□ 0.41
Polr1aO35134 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Polr1aO35134 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Polr1aO35134 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Polr1aO35134 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Polr1aO35134 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Polr1aO35134 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Polr1aO35134 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Polr1aO35134 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Polr1aO35134 Gm37269-201ENSMUST00000193906 1891 ntBASIC17.58■□□□□ 0.41
Polr1aO35134 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC17.58■□□□□ 0.4
Polr1aO35134 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 Gm27440-201ENSMUST00000184785 107 ntBASIC17.58■□□□□ 0.4
Polr1aO35134 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC17.58■□□□□ 0.4
Polr1aO35134 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 Platr10-202ENSMUST00000191479 818 ntBASIC17.58■□□□□ 0.4
Polr1aO35134 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Polr1aO35134 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Polr1aO35134 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Polr1aO35134 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr1aO35134 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr1aO35134 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Polr1aO35134 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr1aO35134 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC17.57■□□□□ 0.4
Polr1aO35134 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr1aO35134 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Polr1aO35134 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC17.57■□□□□ 0.4
Polr1aO35134 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr1aO35134 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Polr1aO35134 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr1aO35134 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Polr1aO35134 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr1aO35134 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC17.57■□□□□ 0.4
Polr1aO35134 Gm14052-201ENSMUST00000121434 1031 ntBASIC17.57■□□□□ 0.4
Polr1aO35134 Gm11942-201ENSMUST00000180255 345 ntBASIC17.57■□□□□ 0.4
Polr1aO35134 Gm7627-201ENSMUST00000183205 999 ntBASIC17.57■□□□□ 0.4
Polr1aO35134 Gm37207-201ENSMUST00000194284 296 ntBASIC17.57■□□□□ 0.4
Polr1aO35134 AC159196.1-201ENSMUST00000225524 377 ntBASIC17.57■□□□□ 0.4
Polr1aO35134 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC17.57■□□□□ 0.4
Polr1aO35134 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr1aO35134 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr1aO35134 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Polr1aO35134 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr1aO35134 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC17.57■□□□□ 0.4
Polr1aO35134 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Polr1aO35134 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Polr1aO35134 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms