Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.57□□□□□ -0.72
Shisa8J3QNX5 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Gm22018-201ENSMUST00000104357 131 ntBASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Gm11531-201ENSMUST00000117614 555 ntBASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Gm11478-201ENSMUST00000117851 599 ntBASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Gm43118-201ENSMUST00000199149 775 ntBASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Gm5950-201ENSMUST00000213337 772 ntBASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.57□□□□□ -0.72
Shisa8J3QNX5 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.57□□□□□ -0.72
Shisa8J3QNX5 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Gm27731-201ENSMUST00000185192 107 ntBASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.56□□□□□ -0.72
Shisa8J3QNX5 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shisa8J3QNX5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms