Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Gm5449-201ENSMUST00000081132 357 ntBASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Gm9244-201ENSMUST00000056767 2129 ntBASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Gm16167-201ENSMUST00000160428 1065 ntBASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Gm43778-201ENSMUST00000199438 199 ntBASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 AC164429.1-201ENSMUST00000224210 518 ntBASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc180J3QNE4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Gm14165-201ENSMUST00000121456 952 ntBASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Gm42815-201ENSMUST00000198787 1470 ntBASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Ccdc180J3QNE4 Gm11957-201ENSMUST00000118304 779 ntBASIC20.89■□□□□ 0.94
Ccdc180J3QNE4 Gm12712-201ENSMUST00000120676 801 ntBASIC20.89■□□□□ 0.94
Ccdc180J3QNE4 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc180J3QNE4 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC20.89■□□□□ 0.94
Ccdc180J3QNE4 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Ccdc180J3QNE4 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Ccdc180J3QNE4 CT030166.5-201ENSMUST00000222249 420 ntBASIC20.89■□□□□ 0.94
Ccdc180J3QNE4 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc180J3QNE4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc180J3QNE4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc180J3QNE4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Ccdc180J3QNE4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc180J3QNE4 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc180J3QNE4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Gm20781-201ENSMUST00000193154 693 ntBASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Gm21736-201ENSMUST00000195399 693 ntBASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Gm5340-201ENSMUST00000203733 880 ntBASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Gm6157-201ENSMUST00000199935 1897 ntBASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc180J3QNE4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms