Protein–RNA interactions for Protein: E9PYU5

Gm44503, Predicted readthrough transcript (NMD candidate), 44503, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm44503E9PYU5 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm44503E9PYU5 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm44503E9PYU5 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm44503E9PYU5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm44503E9PYU5 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.38□□□□□ -0.27
Gm44503E9PYU5 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Gm44503E9PYU5 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm44503E9PYU5 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm44503E9PYU5 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Gm12274-201ENSMUST00000120062 385 ntBASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Gm8723-201ENSMUST00000166076 820 ntBASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Gm8701-201ENSMUST00000169259 874 ntBASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Gm17825-201ENSMUST00000206836 794 ntBASIC13.37□□□□□ -0.27
Gm44503E9PYU5 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Gm6991-201ENSMUST00000218475 1178 ntBASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Gm44503E9PYU5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Gm13422-201ENSMUST00000118834 504 ntBASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Gm4862-201ENSMUST00000170405 438 ntBASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.36□□□□□ -0.27
Gm44503E9PYU5 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Gm44124-201ENSMUST00000204159 472 ntBASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Gm5996-201ENSMUST00000211110 718 ntBASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Gm6722-201ENSMUST00000221586 390 ntBASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm44503E9PYU5 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms