Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm7904-201ENSMUST00000217049 465 ntBASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 CT025618.1-203ENSMUST00000227008 589 ntBASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm37269-201ENSMUST00000193906 1891 ntBASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 AC137950.2-202ENSMUST00000227150 1635 ntBASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Gm23439-201ENSMUST00000104292 132 ntBASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Gm13700-201ENSMUST00000118624 1128 ntBASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Gm6352-201ENSMUST00000203583 1134 ntBASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hfm1D3Z4R1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Mrip-ps-201ENSMUST00000184613 940 ntBASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Gm29164-201ENSMUST00000185454 1024 ntBASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Lect2-202ENSMUST00000225183 823 ntBASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 AC158986.2-201ENSMUST00000227487 618 ntBASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Hfm1D3Z4R1 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hfm1D3Z4R1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Hfm1D3Z4R1 Gm43152-201ENSMUST00000202495 1638 ntBASIC16.08■□□□□ 0.17
Hfm1D3Z4R1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC16.08■□□□□ 0.17
Hfm1D3Z4R1 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Gm12986-201ENSMUST00000119037 967 ntBASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Mir6387-201ENSMUST00000184042 108 ntBASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Gm37723-201ENSMUST00000194480 565 ntBASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Gm44605-201ENSMUST00000206892 949 ntBASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 AC154435.1-201ENSMUST00000223938 959 ntBASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 AC154407.1-201ENSMUST00000226777 526 ntBASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms