Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.62□□□□□ -0.55
H2afb2S4R1M3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Gm15808-201ENSMUST00000119046 604 ntBASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Gm16505-201ENSMUST00000179981 232 ntBASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Gm2965-201ENSMUST00000198365 343 ntBASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.62□□□□□ -0.55
H2afb2S4R1M3 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Gm8100-201ENSMUST00000182906 988 ntBASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Gm27530-201ENSMUST00000184096 98 ntBASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Gm5714-201ENSMUST00000197343 566 ntBASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Gm45575-201ENSMUST00000210283 548 ntBASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb2S4R1M3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb2S4R1M3 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms