Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trim3Q9R1R2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Gm5706-201ENSMUST00000181525 993 ntBASIC11□□□□□ -0.65
Trim3Q9R1R2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11□□□□□ -0.65
Trim3Q9R1R2 Rps4l-202ENSMUST00000204242 789 ntBASIC11□□□□□ -0.65
Trim3Q9R1R2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trim3Q9R1R2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11□□□□□ -0.65
Trim3Q9R1R2 AC153929.1-201ENSMUST00000219009 303 ntBASIC11□□□□□ -0.65
Trim3Q9R1R2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Gm5455-201ENSMUST00000058710 715 ntBASIC11□□□□□ -0.65
Trim3Q9R1R2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11□□□□□ -0.65
Trim3Q9R1R2 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trim3Q9R1R2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11□□□□□ -0.65
Trim3Q9R1R2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trim3Q9R1R2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim3Q9R1R2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Btrc-209ENSMUST00000224478 2194 ntBASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Gm12036-201ENSMUST00000120008 530 ntBASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Mir7070-201ENSMUST00000183657 86 ntBASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim3Q9R1R2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim3Q9R1R2 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim3Q9R1R2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim3Q9R1R2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trim3Q9R1R2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trim3Q9R1R2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim3Q9R1R2 Rgr-203ENSMUST00000225070 4704 ntBASIC10.98□□□□□ -0.65
Trim3Q9R1R2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim3Q9R1R2 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trim3Q9R1R2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim3Q9R1R2 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim3Q9R1R2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim3Q9R1R2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim3Q9R1R2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms