Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Gm13263-201ENSMUST00000121271 838 ntBASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Gm18056-201ENSMUST00000207670 568 ntBASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Gm18061-201ENSMUST00000208350 562 ntBASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Gm18063-201ENSMUST00000208529 568 ntBASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Gm18052-201ENSMUST00000208750 559 ntBASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Gm2553-201ENSMUST00000215986 605 ntBASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Gm26448-201ENSMUST00000082446 203 ntBASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 BC043934-202ENSMUST00000185694 2356 ntBASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prpf40aQ9R1C7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Gm15711-201ENSMUST00000118889 535 ntBASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Gm12380-201ENSMUST00000119012 544 ntBASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Gm15004-201ENSMUST00000119192 630 ntBASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Gm29199-201ENSMUST00000187766 775 ntBASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms