Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Gm4294-201ENSMUST00000105169 614 ntBASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Gm12467-201ENSMUST00000117625 745 ntBASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Gm15549-201ENSMUST00000121595 622 ntBASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Gm16107-201ENSMUST00000162523 862 ntBASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Gm44315-201ENSMUST00000203041 219 ntBASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Gm5996-201ENSMUST00000211110 718 ntBASIC13.87□□□□□ -0.19
Ube3bQ9ES34 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Gm43435-201ENSMUST00000199996 1438 ntBASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3bQ9ES34 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Gm15374-201ENSMUST00000119313 844 ntBASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.86□□□□□ -0.19
Ube3bQ9ES34 AC125539.1-202ENSMUST00000226449 670 ntBASIC13.86□□□□□ -0.19
Ube3bQ9ES34 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.86□□□□□ -0.19
Ube3bQ9ES34 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3bQ9ES34 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Gm14776-201ENSMUST00000121029 887 ntBASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Gm15329-201ENSMUST00000121408 155 ntBASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 Mir7076-201ENSMUST00000183519 74 ntBASIC13.85□□□□□ -0.19
Ube3bQ9ES34 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC13.85□□□□□ -0.19
Ube3bQ9ES34 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3bQ9ES34 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.85□□□□□ -0.19
Ube3bQ9ES34 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms