Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Gm43179-201ENSMUST00000198797 275 ntBASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Gm18711-201ENSMUST00000199341 750 ntBASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Gm43822-201ENSMUST00000200285 476 ntBASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc130Q9D516 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Gm11930-201ENSMUST00000117788 190 ntBASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Gm27046-201ENSMUST00000182160 463 ntBASIC11.75□□□□□ -0.53
Ccdc130Q9D516 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Ccdc130Q9D516 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Gm14644-201ENSMUST00000116671 647 ntBASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Gm14247-201ENSMUST00000120950 237 ntBASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc130Q9D516 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms