Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.88□□□□□ -0.19
Stag1Q9D3E6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Gm15744-201ENSMUST00000161734 213 ntBASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Gm37826-201ENSMUST00000195329 322 ntBASIC13.88□□□□□ -0.19
Stag1Q9D3E6 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.88□□□□□ -0.19
Stag1Q9D3E6 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Stag1Q9D3E6 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.87□□□□□ -0.19
Stag1Q9D3E6 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gm11960-201ENSMUST00000122068 925 ntBASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gm5100-201ENSMUST00000195631 589 ntBASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Stag1Q9D3E6 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.86□□□□□ -0.19
Stag1Q9D3E6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms