Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Gm26286-201ENSMUST00000104166 134 ntBASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Gm27731-201ENSMUST00000185192 107 ntBASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.55□□□□□ -0.56
Ssu72Q9CY97 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.55□□□□□ -0.56
Ssu72Q9CY97 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Gm10312-201ENSMUST00000078515 489 ntBASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Gm27514-201ENSMUST00000183692 110 ntBASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Gm6013-201ENSMUST00000212264 699 ntBASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Gm5455-201ENSMUST00000058710 715 ntBASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ssu72Q9CY97 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Gm22018-201ENSMUST00000104357 131 ntBASIC11.53□□□□□ -0.56
Ssu72Q9CY97 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Gm14660-201ENSMUST00000119809 575 ntBASIC11.53□□□□□ -0.56
Ssu72Q9CY97 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.53□□□□□ -0.56
Ssu72Q9CY97 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms