Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm15515-201ENSMUST00000117827 822 ntBASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Mir6927-201ENSMUST00000184494 71 ntBASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm5714-201ENSMUST00000197343 566 ntBASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm4482-201ENSMUST00000200876 742 ntBASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa3Q9CQ71 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Gm23200-201ENSMUST00000104379 132 ntBASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Gm12217-201ENSMUST00000118858 696 ntBASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Gm11783-201ENSMUST00000119549 885 ntBASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Gm27530-201ENSMUST00000184096 98 ntBASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Mir8093-201ENSMUST00000185043 137 ntBASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Gm5982-201ENSMUST00000196234 512 ntBASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms