Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim11Q99PQ2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim11Q99PQ2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Gm28071-201ENSMUST00000190355 478 ntBASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Gm5982-201ENSMUST00000196234 512 ntBASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Gm44262-201ENSMUST00000204969 372 ntBASIC13.27□□□□□ -0.29
Trim11Q99PQ2 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim11Q99PQ2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Gm11500-201ENSMUST00000118237 601 ntBASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Gm37666-201ENSMUST00000194110 866 ntBASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Gm7940-201ENSMUST00000218195 769 ntBASIC13.26□□□□□ -0.29
Trim11Q99PQ2 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Gm10254-201ENSMUST00000052888 867 ntBASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim11Q99PQ2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms