Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm18063-201ENSMUST00000208529 568 ntBASIC11.68□□□□□ -0.54
Trim33Q99PP7 Gm18052-201ENSMUST00000208750 559 ntBASIC11.68□□□□□ -0.54
Trim33Q99PP7 Gm17827-201ENSMUST00000211825 742 ntBASIC11.68□□□□□ -0.54
Trim33Q99PP7 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.68□□□□□ -0.54
Trim33Q99PP7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim33Q99PP7 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.67□□□□□ -0.54
Trim33Q99PP7 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm26286-201ENSMUST00000104166 134 ntBASIC11.67□□□□□ -0.54
Trim33Q99PP7 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm2260-201ENSMUST00000184965 657 ntBASIC11.67□□□□□ -0.54
Trim33Q99PP7 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm7003-201ENSMUST00000195089 312 ntBASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm8920-201ENSMUST00000196153 924 ntBASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm43037-201ENSMUST00000196808 250 ntBASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm18212-201ENSMUST00000211678 889 ntBASIC11.67□□□□□ -0.54
Trim33Q99PP7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.67□□□□□ -0.54
Trim33Q99PP7 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.67□□□□□ -0.54
Trim33Q99PP7 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.67□□□□□ -0.54
Trim33Q99PP7 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim33Q99PP7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.66□□□□□ -0.54
Trim33Q99PP7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.66□□□□□ -0.54
Trim33Q99PP7 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.66□□□□□ -0.54
Trim33Q99PP7 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms