Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Gm27516-201ENSMUST00000184237 98 ntBASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Gm18065-201ENSMUST00000221395 526 ntBASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Gm7399-201ENSMUST00000032395 858 ntBASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap3Q99LM2 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms