Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Gm15374-201ENSMUST00000119313 844 ntBASIC14.36□□□□□ -0.11
RtcbQ99LF4 Gm15196-201ENSMUST00000121406 482 ntBASIC14.36□□□□□ -0.11
RtcbQ99LF4 Gm14165-201ENSMUST00000121456 952 ntBASIC14.36□□□□□ -0.11
RtcbQ99LF4 Gm11960-201ENSMUST00000122068 925 ntBASIC14.36□□□□□ -0.11
RtcbQ99LF4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Gm44323-201ENSMUST00000198689 129 ntBASIC14.36□□□□□ -0.11
RtcbQ99LF4 AC134248.1-201ENSMUST00000216113 1176 ntBASIC14.36□□□□□ -0.11
RtcbQ99LF4 Gm9487-201ENSMUST00000216600 472 ntBASIC14.36□□□□□ -0.11
RtcbQ99LF4 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Smok4a-201ENSMUST00000074512 1455 ntBASIC14.36□□□□□ -0.11
RtcbQ99LF4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RtcbQ99LF4 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC14.35□□□□□ -0.11
RtcbQ99LF4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Gm23612-201ENSMUST00000103823 110 ntBASIC14.35□□□□□ -0.11
RtcbQ99LF4 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Gm8302-201ENSMUST00000119217 852 ntBASIC14.35□□□□□ -0.11
RtcbQ99LF4 Gm13981-201ENSMUST00000122360 447 ntBASIC14.35□□□□□ -0.11
RtcbQ99LF4 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Gm26368-201ENSMUST00000157826 118 ntBASIC14.35□□□□□ -0.11
RtcbQ99LF4 Gm17221-201ENSMUST00000163909 481 ntBASIC14.35□□□□□ -0.11
RtcbQ99LF4 Gm17073-201ENSMUST00000168069 556 ntBASIC14.35□□□□□ -0.11
RtcbQ99LF4 Gm23576-201ENSMUST00000179918 110 ntBASIC14.35□□□□□ -0.11
RtcbQ99LF4 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Gm9369-201ENSMUST00000196009 733 ntBASIC14.35□□□□□ -0.11
RtcbQ99LF4 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RtcbQ99LF4 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Gm24992-201ENSMUST00000157412 130 ntBASIC14.34□□□□□ -0.11
RtcbQ99LF4 Gm25226-201ENSMUST00000158198 123 ntBASIC14.34□□□□□ -0.11
RtcbQ99LF4 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Gm25998-201ENSMUST00000175397 53 ntBASIC14.34□□□□□ -0.11
RtcbQ99LF4 Gm26272-201ENSMUST00000179241 132 ntBASIC14.34□□□□□ -0.11
RtcbQ99LF4 Gm18035-201ENSMUST00000211962 589 ntBASIC14.34□□□□□ -0.11
RtcbQ99LF4 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC14.34□□□□□ -0.11
RtcbQ99LF4 Capsl-202ENSMUST00000226688 739 ntBASIC14.34□□□□□ -0.11
RtcbQ99LF4 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RtcbQ99LF4 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC14.34□□□□□ -0.11
RtcbQ99LF4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RtcbQ99LF4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RtcbQ99LF4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RtcbQ99LF4 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.33□□□□□ -0.11
RtcbQ99LF4 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RtcbQ99LF4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RtcbQ99LF4 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RtcbQ99LF4 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RtcbQ99LF4 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RtcbQ99LF4 Gm12389-201ENSMUST00000117696 418 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms