Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gm18187-201ENSMUST00000196476 984 ntBASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.37□□□□□ -0.75
Thumpd1Q99J36 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Gm12390-201ENSMUST00000117897 397 ntBASIC10.36□□□□□ -0.75
Thumpd1Q99J36 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Gm2553-201ENSMUST00000215986 605 ntBASIC10.36□□□□□ -0.75
Thumpd1Q99J36 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.36□□□□□ -0.75
Thumpd1Q99J36 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Thumpd1Q99J36 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.35□□□□□ -0.75
Thumpd1Q99J36 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms