Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.31□□□□□ -0.28
Trex1Q91XB0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Gm8111-201ENSMUST00000117659 987 ntBASIC13.3□□□□□ -0.28
Trex1Q91XB0 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.3□□□□□ -0.28
Trex1Q91XB0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Gm25554-201ENSMUST00000158075 113 ntBASIC13.3□□□□□ -0.28
Trex1Q91XB0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Mir7051-201ENSMUST00000184167 73 ntBASIC13.3□□□□□ -0.28
Trex1Q91XB0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Gm8197-202ENSMUST00000193422 934 ntBASIC13.3□□□□□ -0.28
Trex1Q91XB0 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Gm6722-201ENSMUST00000221586 390 ntBASIC13.3□□□□□ -0.28
Trex1Q91XB0 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.3□□□□□ -0.28
Trex1Q91XB0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trex1Q91XB0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.3□□□□□ -0.28
Trex1Q91XB0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.3□□□□□ -0.28
Trex1Q91XB0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex1Q91XB0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.29□□□□□ -0.28
Trex1Q91XB0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Gm14270-201ENSMUST00000118388 846 ntBASIC13.29□□□□□ -0.28
Trex1Q91XB0 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Gm9135-201ENSMUST00000182963 990 ntBASIC13.29□□□□□ -0.28
Trex1Q91XB0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trex1Q91XB0 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.29□□□□□ -0.28
Trex1Q91XB0 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Gm18514-201ENSMUST00000218980 436 ntBASIC13.29□□□□□ -0.28
Trex1Q91XB0 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.29□□□□□ -0.28
Trex1Q91XB0 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.29□□□□□ -0.28
Trex1Q91XB0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trex1Q91XB0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms