Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm11783-201ENSMUST00000119549 885 ntBASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm15566-201ENSMUST00000121130 590 ntBASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Ginm1-202ENSMUST00000065124 300 ntBASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rprd1aQ8VDS4 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rprd1aQ8VDS4 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rprd1aQ8VDS4 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rprd1aQ8VDS4 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.02□□□□□ -0.48
Rprd1aQ8VDS4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rprd1aQ8VDS4 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Rprd1aQ8VDS4 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rprd1aQ8VDS4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rprd1aQ8VDS4 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.02□□□□□ -0.48
Rprd1aQ8VDS4 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.02□□□□□ -0.48
Rprd1aQ8VDS4 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Gm12579-201ENSMUST00000118040 783 ntBASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Gm13611-201ENSMUST00000118269 318 ntBASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Gm13045-201ENSMUST00000119019 712 ntBASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Gm11700-201ENSMUST00000119409 403 ntBASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Gm45113-201ENSMUST00000207518 165 ntBASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Gm6867-201ENSMUST00000219165 425 ntBASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rprd1aQ8VDS4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms