Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.93□□□□□ -0.5
CopaQ8CIE6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.93□□□□□ -0.5
CopaQ8CIE6 Gm23596-201ENSMUST00000104304 132 ntBASIC11.93□□□□□ -0.5
CopaQ8CIE6 Gm14058-201ENSMUST00000116082 735 ntBASIC11.93□□□□□ -0.5
CopaQ8CIE6 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.93□□□□□ -0.5
CopaQ8CIE6 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.93□□□□□ -0.5
CopaQ8CIE6 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Gm19353-201ENSMUST00000184561 445 ntBASIC11.93□□□□□ -0.5
CopaQ8CIE6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.93□□□□□ -0.5
CopaQ8CIE6 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.93□□□□□ -0.5
CopaQ8CIE6 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.93□□□□□ -0.5
CopaQ8CIE6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.93□□□□□ -0.5
CopaQ8CIE6 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CopaQ8CIE6 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Gm21811-201ENSMUST00000096485 930 ntBASIC11.93□□□□□ -0.5
CopaQ8CIE6 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.93□□□□□ -0.5
CopaQ8CIE6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.92□□□□□ -0.5
CopaQ8CIE6 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Gm12196-201ENSMUST00000120954 262 ntBASIC11.92□□□□□ -0.5
CopaQ8CIE6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Gm25881-201ENSMUST00000157783 103 ntBASIC11.92□□□□□ -0.5
CopaQ8CIE6 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.92□□□□□ -0.5
CopaQ8CIE6 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.92□□□□□ -0.5
CopaQ8CIE6 Gm4607-201ENSMUST00000206649 577 ntBASIC11.92□□□□□ -0.5
CopaQ8CIE6 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.92□□□□□ -0.5
CopaQ8CIE6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.92□□□□□ -0.5
CopaQ8CIE6 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopaQ8CIE6 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms