Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28aQ8CEI3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Mir1982-201ENSMUST00000157368 74 ntBASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Gm5455-201ENSMUST00000058710 715 ntBASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28aQ8CEI3 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Gm29396-201ENSMUST00000185659 716 ntBASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Gm10608-202ENSMUST00000213924 676 ntBASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Gm30285-201ENSMUST00000214614 422 ntBASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc28aQ8CEI3 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms