Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Gm13097-201ENSMUST00000210722 397 ntBASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Gm807-202ENSMUST00000224929 408 ntBASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrif1Q8CDD9 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm24934-201ENSMUST00000103764 111 ntBASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm11700-201ENSMUST00000119409 403 ntBASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm15547-201ENSMUST00000122152 333 ntBASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm38241-201ENSMUST00000192641 898 ntBASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm6082-201ENSMUST00000215204 454 ntBASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrif1Q8CDD9 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lrif1Q8CDD9 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lrif1Q8CDD9 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lrif1Q8CDD9 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lrif1Q8CDD9 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lrif1Q8CDD9 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lrif1Q8CDD9 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms