Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm12957-201ENSMUST00000117835 377 ntBASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Gm38314-201ENSMUST00000195709 625 ntBASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Gm18935-201ENSMUST00000212692 664 ntBASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Gzmn-202ENSMUST00000225535 989 ntBASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Gm10254-201ENSMUST00000052888 867 ntBASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gm6963-201ENSMUST00000147879 379 ntBASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gm5070-201ENSMUST00000177599 862 ntBASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gm19287-201ENSMUST00000203190 358 ntBASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2bQ8BJF9 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms