Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh20Q8BIZ0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Gm14028-201ENSMUST00000117434 479 ntBASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh20Q8BIZ0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Rgr-203ENSMUST00000225070 4704 ntBASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Gm23912-201ENSMUST00000104687 87 ntBASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 Gm27627-201ENSMUST00000183644 150 ntBASIC11.37□□□□□ -0.59
Pcdh20Q8BIZ0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms