Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm12247-201ENSMUST00000117585 670 ntBASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm11956-201ENSMUST00000119525 512 ntBASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm13408-201ENSMUST00000119822 798 ntBASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm13935-201ENSMUST00000121859 798 ntBASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm44008-201ENSMUST00000204345 412 ntBASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 AC073947.1-201ENSMUST00000216991 649 ntBASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm10254-201ENSMUST00000052888 867 ntBASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Olfr584-201ENSMUST00000098210 964 ntBASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.84□□□□□ -0.67
Atg4dQ8BGV9 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Gm13611-201ENSMUST00000118269 318 ntBASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Gm11836-201ENSMUST00000121022 441 ntBASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Mir6546-201ENSMUST00000184460 62 ntBASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Gm7504-201ENSMUST00000201449 424 ntBASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Gm43852-201ENSMUST00000202098 917 ntBASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Gm44100-201ENSMUST00000204329 436 ntBASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Gm8342-201ENSMUST00000209839 757 ntBASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Nsd1-205ENSMUST00000224693 852 ntBASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atg4dQ8BGV9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms