Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm14071-201ENSMUST00000117817 509 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Mir432-201ENSMUST00000157230 75 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm24078-201ENSMUST00000158184 103 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm4462-201ENSMUST00000166453 492 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm4775-201ENSMUST00000169588 402 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm18552-201ENSMUST00000187425 538 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm6564-201ENSMUST00000075377 619 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm14005-210ENSMUST00000225087 1413 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm6158-201ENSMUST00000109467 904 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm12345-201ENSMUST00000119288 898 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Mir8093-201ENSMUST00000185043 137 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.76□□□□□ -0.85
Ttc28Q80XJ3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm15528-201ENSMUST00000117821 864 ntBASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm12736-201ENSMUST00000119330 236 ntBASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm6606-201ENSMUST00000193613 947 ntBASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm44323-201ENSMUST00000198689 129 ntBASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Gm9102-201ENSMUST00000219250 465 ntBASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ttc28Q80XJ3 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms