Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Gm21039-201ENSMUST00000223359 2012 ntBASIC12.39□□□□□ -0.43
CtifQ6PEE2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Gm24934-201ENSMUST00000103764 111 ntBASIC12.39□□□□□ -0.43
CtifQ6PEE2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Gm12463-201ENSMUST00000118271 849 ntBASIC12.39□□□□□ -0.43
CtifQ6PEE2 Gm10156-201ENSMUST00000122364 462 ntBASIC12.39□□□□□ -0.43
CtifQ6PEE2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CtifQ6PEE2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Gm37497-201ENSMUST00000195830 798 ntBASIC12.39□□□□□ -0.43
CtifQ6PEE2 Gm45668-201ENSMUST00000211271 493 ntBASIC12.39□□□□□ -0.43
CtifQ6PEE2 Gm45930-201ENSMUST00000221330 292 ntBASIC12.39□□□□□ -0.43
CtifQ6PEE2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.39□□□□□ -0.43
CtifQ6PEE2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.39□□□□□ -0.43
CtifQ6PEE2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CtifQ6PEE2 Rgr-203ENSMUST00000225070 4704 ntBASIC12.39□□□□□ -0.43
CtifQ6PEE2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Gm12742-201ENSMUST00000117326 410 ntBASIC12.38□□□□□ -0.43
CtifQ6PEE2 Gm11425-201ENSMUST00000119608 498 ntBASIC12.38□□□□□ -0.43
CtifQ6PEE2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Gm37917-201ENSMUST00000194711 392 ntBASIC12.38□□□□□ -0.43
CtifQ6PEE2 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.38□□□□□ -0.43
CtifQ6PEE2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Gm19163-201ENSMUST00000223313 780 ntBASIC12.38□□□□□ -0.43
CtifQ6PEE2 Gm9396-201ENSMUST00000076703 567 ntBASIC12.38□□□□□ -0.43
CtifQ6PEE2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.38□□□□□ -0.43
CtifQ6PEE2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CtifQ6PEE2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Gm4984-201ENSMUST00000115987 360 ntBASIC12.37□□□□□ -0.43
CtifQ6PEE2 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.37□□□□□ -0.43
CtifQ6PEE2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Mir7654-201ENSMUST00000185082 70 ntBASIC12.37□□□□□ -0.43
CtifQ6PEE2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.37□□□□□ -0.43
CtifQ6PEE2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CtifQ6PEE2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms