Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Gm13035-201ENSMUST00000117496 342 ntBASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Gm43378-201ENSMUST00000199336 582 ntBASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Nsd1-205ENSMUST00000224693 852 ntBASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcc2Q6PDG5 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcc2Q6PDG5 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcc2Q6PDG5 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcc2Q6PDG5 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Smarcc2Q6PDG5 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcc2Q6PDG5 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcc2Q6PDG5 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Gm5369-201ENSMUST00000217499 588 ntBASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcc2Q6PDG5 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Gm11331-201ENSMUST00000119764 288 ntBASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Gm27530-201ENSMUST00000184096 98 ntBASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Gm18065-201ENSMUST00000221395 526 ntBASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms