Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm43244-201ENSMUST00000196994 1285 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 AC164099.1-201ENSMUST00000227780 333 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Gm23439-201ENSMUST00000104292 132 ntBASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Gm13286-201ENSMUST00000117750 537 ntBASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Gm18014-201ENSMUST00000183369 817 ntBASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Gm29100-201ENSMUST00000187564 4410 ntBASIC17.65■□□□□ 0.42
Slx4Q6P1D7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC17.64■□□□□ 0.42
Slx4Q6P1D7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC17.64■□□□□ 0.42
Slx4Q6P1D7 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slx4Q6P1D7 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slx4Q6P1D7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slx4Q6P1D7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.64■□□□□ 0.42
Slx4Q6P1D7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 AC154354.1-203ENSMUST00000225565 1364 ntBASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Gm44573-201ENSMUST00000191753 2370 ntBASIC17.64■□□□□ 0.41
Slx4Q6P1D7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Gm19246-201ENSMUST00000173599 255 ntBASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Gm18733-202ENSMUST00000174447 401 ntBASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Mir6359-201ENSMUST00000183668 81 ntBASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Gm37269-201ENSMUST00000193906 1891 ntBASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Gm9244-201ENSMUST00000056767 2129 ntBASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slx4Q6P1D7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Gm18001-201ENSMUST00000212023 688 ntBASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slx4Q6P1D7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms