Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
AtmQ62388 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
AtmQ62388 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
AtmQ62388 Gm19927-201ENSMUST00000185792 781 ntBASIC10.72□□□□□ -0.69
AtmQ62388 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.72□□□□□ -0.69
AtmQ62388 Gm4903-201ENSMUST00000210462 405 ntBASIC10.72□□□□□ -0.69
AtmQ62388 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
AtmQ62388 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
AtmQ62388 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
AtmQ62388 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
AtmQ62388 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
AtmQ62388 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
AtmQ62388 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
AtmQ62388 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
AtmQ62388 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
AtmQ62388 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
AtmQ62388 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
AtmQ62388 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC10.71□□□□□ -0.69
AtmQ62388 Gm16228-201ENSMUST00000162286 809 ntBASIC10.71□□□□□ -0.69
AtmQ62388 Gm44917-201ENSMUST00000208798 520 ntBASIC10.71□□□□□ -0.69
AtmQ62388 AC192333.3-201ENSMUST00000224041 463 ntBASIC10.71□□□□□ -0.69
AtmQ62388 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
AtmQ62388 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.71□□□□□ -0.69
AtmQ62388 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
AtmQ62388 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
AtmQ62388 Gm14633-201ENSMUST00000121152 470 ntBASIC10.71□□□□□ -0.69
AtmQ62388 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Gm44540-201ENSMUST00000205640 354 ntBASIC10.71□□□□□ -0.69
AtmQ62388 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
AtmQ62388 Gm8618-201ENSMUST00000097570 432 ntBASIC10.71□□□□□ -0.69
AtmQ62388 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.71□□□□□ -0.7
AtmQ62388 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.71□□□□□ -0.7
AtmQ62388 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
AtmQ62388 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
AtmQ62388 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
AtmQ62388 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
AtmQ62388 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.7
AtmQ62388 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
AtmQ62388 Gm7815-201ENSMUST00000196104 832 ntBASIC10.71□□□□□ -0.7
AtmQ62388 AC164614.1-201ENSMUST00000216038 397 ntBASIC10.71□□□□□ -0.7
AtmQ62388 Gm7242-201ENSMUST00000221134 705 ntBASIC10.71□□□□□ -0.7
AtmQ62388 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.71□□□□□ -0.7
AtmQ62388 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
AtmQ62388 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
AtmQ62388 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
AtmQ62388 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
AtmQ62388 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.7□□□□□ -0.7
AtmQ62388 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
AtmQ62388 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.7□□□□□ -0.7
AtmQ62388 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
AtmQ62388 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.7□□□□□ -0.7
AtmQ62388 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.7□□□□□ -0.7
AtmQ62388 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.7□□□□□ -0.7
AtmQ62388 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.7□□□□□ -0.7
AtmQ62388 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
AtmQ62388 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.7□□□□□ -0.7
AtmQ62388 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.7□□□□□ -0.7
AtmQ62388 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.7□□□□□ -0.7
AtmQ62388 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.7□□□□□ -0.7
AtmQ62388 Gm18733-202ENSMUST00000174447 401 ntBASIC10.7□□□□□ -0.7
AtmQ62388 Gm6114-201ENSMUST00000182472 968 ntBASIC10.7□□□□□ -0.7
AtmQ62388 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
AtmQ62388 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
AtmQ62388 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms