Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxd4Q60688 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxd4Q60688 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxd4Q60688 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Foxd4Q60688 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Foxd4Q60688 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Arhgap6-202ENSMUST00000087016 1310 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Gm26143-201ENSMUST00000104480 108 ntBASIC12.49□□□□□ -0.41
Foxd4Q60688 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Gm13350-201ENSMUST00000120519 479 ntBASIC12.49□□□□□ -0.41
Foxd4Q60688 Gm14840-201ENSMUST00000122135 594 ntBASIC12.49□□□□□ -0.41
Foxd4Q60688 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.49□□□□□ -0.41
Foxd4Q60688 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.49□□□□□ -0.41
Foxd4Q60688 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Gm18827-201ENSMUST00000188341 790 ntBASIC12.49□□□□□ -0.41
Foxd4Q60688 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Gm18387-201ENSMUST00000220333 702 ntBASIC12.49□□□□□ -0.41
Foxd4Q60688 AC134335.1-201ENSMUST00000227626 329 ntBASIC12.49□□□□□ -0.41
Foxd4Q60688 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Foxd4Q60688 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxd4Q60688 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Foxd4Q60688 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.49□□□□□ -0.41
Foxd4Q60688 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.48□□□□□ -0.41
Foxd4Q60688 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Foxd4Q60688 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Foxd4Q60688 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Gm15071-201ENSMUST00000118189 1366 ntBASIC12.48□□□□□ -0.41
Foxd4Q60688 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Gm44562-201ENSMUST00000207194 1347 ntBASIC12.48□□□□□ -0.41
Foxd4Q60688 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Foxd4Q60688 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Foxd4Q60688 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Foxd4Q60688 Gm13438-201ENSMUST00000120100 573 ntBASIC12.48□□□□□ -0.41
Foxd4Q60688 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC12.48□□□□□ -0.41
Foxd4Q60688 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC12.48□□□□□ -0.41
Foxd4Q60688 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.48□□□□□ -0.41
Foxd4Q60688 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Foxd4Q60688 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.48□□□□□ -0.41
Foxd4Q60688 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.48□□□□□ -0.41
Foxd4Q60688 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.48□□□□□ -0.41
Foxd4Q60688 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Foxd4Q60688 Gm29588-201ENSMUST00000185738 298 ntBASIC12.48□□□□□ -0.41
Foxd4Q60688 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.48□□□□□ -0.41
Foxd4Q60688 Gm20136-201ENSMUST00000207501 891 ntBASIC12.48□□□□□ -0.41
Foxd4Q60688 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Foxd4Q60688 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.48□□□□□ -0.41
Foxd4Q60688 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Foxd4Q60688 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Foxd4Q60688 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxd4Q60688 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms