Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.11□□□□□ -0.63
Nr1h4Q60641 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.11□□□□□ -0.63
Nr1h4Q60641 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.11□□□□□ -0.63
Nr1h4Q60641 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nr1h4Q60641 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.1□□□□□ -0.63
Nr1h4Q60641 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Gm11989-201ENSMUST00000117240 672 ntBASIC11.1□□□□□ -0.63
Nr1h4Q60641 Gm11531-201ENSMUST00000117614 555 ntBASIC11.1□□□□□ -0.63
Nr1h4Q60641 Gm11362-201ENSMUST00000118838 850 ntBASIC11.1□□□□□ -0.63
Nr1h4Q60641 Gm4986-201ENSMUST00000119731 549 ntBASIC11.1□□□□□ -0.63
Nr1h4Q60641 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Gm38158-201ENSMUST00000194617 339 ntBASIC11.1□□□□□ -0.63
Nr1h4Q60641 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Gm43133-201ENSMUST00000197472 463 ntBASIC11.1□□□□□ -0.63
Nr1h4Q60641 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.1□□□□□ -0.63
Nr1h4Q60641 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.1□□□□□ -0.63
Nr1h4Q60641 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.1□□□□□ -0.63
Nr1h4Q60641 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.1□□□□□ -0.63
Nr1h4Q60641 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.09□□□□□ -0.63
Nr1h4Q60641 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.09□□□□□ -0.63
Nr1h4Q60641 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.09□□□□□ -0.63
Nr1h4Q60641 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Gm22018-201ENSMUST00000104357 131 ntBASIC11.09□□□□□ -0.63
Nr1h4Q60641 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.09□□□□□ -0.63
Nr1h4Q60641 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.09□□□□□ -0.63
Nr1h4Q60641 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms