Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Gm20482-202ENSMUST00000174729 825 ntBASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43aQ3TL54 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Gm11531-201ENSMUST00000117614 555 ntBASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Gm19287-201ENSMUST00000203190 358 ntBASIC12.34□□□□□ -0.43
Trim43aQ3TL54 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.34□□□□□ -0.43
Trim43aQ3TL54 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim43aQ3TL54 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim43aQ3TL54 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.33□□□□□ -0.43
Trim43aQ3TL54 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trim43aQ3TL54 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim43aQ3TL54 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Gm22323-201ENSMUST00000103832 109 ntBASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Gm25214-201ENSMUST00000104573 129 ntBASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Gm11989-201ENSMUST00000117240 672 ntBASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Gm11362-201ENSMUST00000118838 850 ntBASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Gm6439-201ENSMUST00000199849 862 ntBASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms