Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm8343-201ENSMUST00000182705 994 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm28937-201ENSMUST00000185413 695 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm29400-201ENSMUST00000187208 695 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm28662-201ENSMUST00000188446 695 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm28251-201ENSMUST00000188835 695 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm37318-201ENSMUST00000194325 695 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm38017-201ENSMUST00000194768 695 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm37287-201ENSMUST00000195449 695 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm37793-201ENSMUST00000195548 695 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm18065-201ENSMUST00000221395 526 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.84□□□□□ -0.67
Trappc13Q3TIR1 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Gm14723-201ENSMUST00000118686 215 ntBASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Gm5616-201ENSMUST00000165252 384 ntBASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Gm8741-201ENSMUST00000174736 384 ntBASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Gm27627-201ENSMUST00000183644 150 ntBASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Gm43184-201ENSMUST00000197247 542 ntBASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Gm17812-201ENSMUST00000204935 318 ntBASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Gm44967-201ENSMUST00000207047 631 ntBASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Gm10254-201ENSMUST00000052888 867 ntBASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Erich3-203ENSMUST00000189969 3460 ntBASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Trappc13Q3TIR1 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trappc13Q3TIR1 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms