Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.73□□□□□ -0.53
Pfdn6Q03958 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Gm9192-201ENSMUST00000183221 985 ntBASIC11.73□□□□□ -0.53
Pfdn6Q03958 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.73□□□□□ -0.53
Pfdn6Q03958 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.73□□□□□ -0.53
Pfdn6Q03958 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Gm6082-201ENSMUST00000215204 454 ntBASIC11.73□□□□□ -0.53
Pfdn6Q03958 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.73□□□□□ -0.53
Pfdn6Q03958 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn6Q03958 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.72□□□□□ -0.53
Pfdn6Q03958 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Gm13996-201ENSMUST00000118456 430 ntBASIC11.72□□□□□ -0.53
Pfdn6Q03958 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.72□□□□□ -0.53
Pfdn6Q03958 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Gm28071-201ENSMUST00000190355 478 ntBASIC11.72□□□□□ -0.53
Pfdn6Q03958 Gm18038-201ENSMUST00000197900 485 ntBASIC11.72□□□□□ -0.53
Pfdn6Q03958 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.72□□□□□ -0.53
Pfdn6Q03958 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn6Q03958 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Pfdn6Q03958 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms