Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.48□□□□□ -0.41
VcpQ01853 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.48□□□□□ -0.41
VcpQ01853 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.48□□□□□ -0.41
VcpQ01853 Gm43778-201ENSMUST00000199438 199 ntBASIC12.48□□□□□ -0.41
VcpQ01853 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.48□□□□□ -0.41
VcpQ01853 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.48□□□□□ -0.41
VcpQ01853 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.48□□□□□ -0.41
VcpQ01853 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.48□□□□□ -0.41
VcpQ01853 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
VcpQ01853 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VcpQ01853 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VcpQ01853 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.47□□□□□ -0.41
VcpQ01853 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
VcpQ01853 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VcpQ01853 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VcpQ01853 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VcpQ01853 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.47□□□□□ -0.41
VcpQ01853 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
VcpQ01853 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
VcpQ01853 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VcpQ01853 Gm11451-201ENSMUST00000118946 630 ntBASIC12.47□□□□□ -0.41
VcpQ01853 Gm14247-201ENSMUST00000120950 237 ntBASIC12.47□□□□□ -0.41
VcpQ01853 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.47□□□□□ -0.41
VcpQ01853 Rprl1-201ENSMUST00000158050 327 ntBASIC12.47□□□□□ -0.41
VcpQ01853 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VcpQ01853 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
VcpQ01853 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VcpQ01853 Mir6923-201ENSMUST00000184592 72 ntBASIC12.47□□□□□ -0.41
VcpQ01853 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.47□□□□□ -0.41
VcpQ01853 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.47□□□□□ -0.41
VcpQ01853 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Gm9136-201ENSMUST00000193368 454 ntBASIC12.47□□□□□ -0.41
VcpQ01853 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
VcpQ01853 Gm6905-201ENSMUST00000205729 511 ntBASIC12.47□□□□□ -0.41
VcpQ01853 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.47□□□□□ -0.41
VcpQ01853 Gm17827-201ENSMUST00000211825 742 ntBASIC12.47□□□□□ -0.41
VcpQ01853 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.47□□□□□ -0.41
VcpQ01853 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.47□□□□□ -0.41
VcpQ01853 Gm8894-201ENSMUST00000074642 666 ntBASIC12.47□□□□□ -0.41
VcpQ01853 Mir483-201ENSMUST00000093631 73 ntBASIC12.47□□□□□ -0.41
VcpQ01853 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.47□□□□□ -0.41
VcpQ01853 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VcpQ01853 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcpQ01853 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.46□□□□□ -0.41
VcpQ01853 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
VcpQ01853 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
VcpQ01853 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.46□□□□□ -0.41
VcpQ01853 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.46□□□□□ -0.41
VcpQ01853 Gm22877-201ENSMUST00000175451 105 ntBASIC12.46□□□□□ -0.41
VcpQ01853 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.46□□□□□ -0.41
VcpQ01853 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.46□□□□□ -0.41
VcpQ01853 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VcpQ01853 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.46□□□□□ -0.41
VcpQ01853 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.46□□□□□ -0.41
VcpQ01853 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.46□□□□□ -0.41
VcpQ01853 Gm270-201ENSMUST00000223010 976 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms