Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.81□□□□□ -0.36
Lig3P97386 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lig3P97386 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.81□□□□□ -0.36
Lig3P97386 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lig3P97386 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Lig3P97386 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.8□□□□□ -0.36
Lig3P97386 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.8□□□□□ -0.36
Lig3P97386 Cog3-203ENSMUST00000227473 4197 ntBASIC12.8□□□□□ -0.36
Lig3P97386 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lig3P97386 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.8□□□□□ -0.36
Lig3P97386 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Lig3P97386 Gm22133-201ENSMUST00000102082 109 ntBASIC12.8□□□□□ -0.36
Lig3P97386 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.8□□□□□ -0.36
Lig3P97386 Mir1901-201ENSMUST00000122616 78 ntBASIC12.8□□□□□ -0.36
Lig3P97386 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.8□□□□□ -0.36
Lig3P97386 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lig3P97386 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.8□□□□□ -0.36
Lig3P97386 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.8□□□□□ -0.36
Lig3P97386 Mir7686-201ENSMUST00000200604 57 ntBASIC12.8□□□□□ -0.36
Lig3P97386 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Lig3P97386 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.8□□□□□ -0.36
Lig3P97386 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.8□□□□□ -0.36
Lig3P97386 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.8□□□□□ -0.36
Lig3P97386 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lig3P97386 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.8□□□□□ -0.36
Lig3P97386 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Lig3P97386 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.8□□□□□ -0.36
Lig3P97386 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.8□□□□□ -0.36
Lig3P97386 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lig3P97386 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lig3P97386 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Lig3P97386 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.79□□□□□ -0.36
Lig3P97386 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lig3P97386 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.79□□□□□ -0.36
Lig3P97386 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lig3P97386 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.79□□□□□ -0.36
Lig3P97386 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.79□□□□□ -0.36
Lig3P97386 Gm13315-201ENSMUST00000120376 991 ntBASIC12.79□□□□□ -0.36
Lig3P97386 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.79□□□□□ -0.36
Lig3P97386 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.79□□□□□ -0.36
Lig3P97386 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.79□□□□□ -0.36
Lig3P97386 Gm17827-201ENSMUST00000211825 742 ntBASIC12.79□□□□□ -0.36
Lig3P97386 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.79□□□□□ -0.36
Lig3P97386 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.79□□□□□ -0.36
Lig3P97386 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lig3P97386 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.79□□□□□ -0.36
Lig3P97386 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.79□□□□□ -0.36
Lig3P97386 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lig3P97386 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lig3P97386 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lig3P97386 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lig3P97386 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lig3P97386 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lig3P97386 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms