Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43cP86449 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim43cP86449 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trim43cP86449 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim43cP86449 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim43cP86449 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim43cP86449 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.66□□□□□ -0.38
Trim43cP86449 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trim43cP86449 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.66□□□□□ -0.38
Trim43cP86449 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trim43cP86449 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trim43cP86449 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Gm11941-201ENSMUST00000119904 610 ntBASIC12.66□□□□□ -0.38
Trim43cP86449 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim43cP86449 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim43cP86449 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim43cP86449 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.66□□□□□ -0.38
Trim43cP86449 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim43cP86449 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.66□□□□□ -0.38
Trim43cP86449 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.66□□□□□ -0.38
Trim43cP86449 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.66□□□□□ -0.38
Trim43cP86449 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim43cP86449 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim43cP86449 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43cP86449 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trim43cP86449 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.65□□□□□ -0.38
Trim43cP86449 Gm23251-201ENSMUST00000103773 110 ntBASIC12.65□□□□□ -0.38
Trim43cP86449 Gm14058-201ENSMUST00000116082 735 ntBASIC12.65□□□□□ -0.38
Trim43cP86449 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.65□□□□□ -0.38
Trim43cP86449 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Rps4l-202ENSMUST00000204242 789 ntBASIC12.65□□□□□ -0.38
Trim43cP86449 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim43cP86449 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim43cP86449 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.65□□□□□ -0.38
Trim43cP86449 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim43cP86449 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.65□□□□□ -0.38
Trim43cP86449 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim43cP86449 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43cP86449 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.39
Trim43cP86449 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim43cP86449 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.65□□□□□ -0.39
Trim43cP86449 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim43cP86449 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim43cP86449 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim43cP86449 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.64□□□□□ -0.39
Trim43cP86449 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 132.6 ms