Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Trim43bP86448 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trim43bP86448 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim43bP86448 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim43bP86448 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim43bP86448 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim43bP86448 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Gm12997-201ENSMUST00000120207 640 ntBASIC12.01□□□□□ -0.49
Trim43bP86448 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Gm6963-201ENSMUST00000147879 379 ntBASIC12.01□□□□□ -0.49
Trim43bP86448 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim43bP86448 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.01□□□□□ -0.49
Trim43bP86448 Gm9230-201ENSMUST00000188228 532 ntBASIC12.01□□□□□ -0.49
Trim43bP86448 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Gm43002-201ENSMUST00000200310 155 ntBASIC12.01□□□□□ -0.49
Trim43bP86448 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.01□□□□□ -0.49
Trim43bP86448 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.01□□□□□ -0.49
Trim43bP86448 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim43bP86448 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trim43bP86448 Gm39404-201ENSMUST00000216350 313 ntBASIC12.01□□□□□ -0.49
Trim43bP86448 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim43bP86448 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim43bP86448 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim43bP86448 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trim43bP86448 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.01□□□□□ -0.49
Trim43bP86448 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trim43bP86448 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43bP86448 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim43bP86448 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Gm14644-201ENSMUST00000116671 647 ntBASIC12□□□□□ -0.49
Trim43bP86448 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Gm13996-201ENSMUST00000118456 430 ntBASIC12□□□□□ -0.49
Trim43bP86448 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12□□□□□ -0.49
Trim43bP86448 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12□□□□□ -0.49
Trim43bP86448 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12□□□□□ -0.49
Trim43bP86448 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12□□□□□ -0.49
Trim43bP86448 Gm8856-201ENSMUST00000185254 1144 ntBASIC12□□□□□ -0.49
Trim43bP86448 Gm43068-201ENSMUST00000201095 1273 ntBASIC12□□□□□ -0.49
Trim43bP86448 Gm45186-201ENSMUST00000206874 478 ntBASIC12□□□□□ -0.49
Trim43bP86448 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12□□□□□ -0.49
Trim43bP86448 Gm19208-201ENSMUST00000213861 912 ntBASIC12□□□□□ -0.49
Trim43bP86448 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim43bP86448 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim43bP86448 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trim43bP86448 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Trim43bP86448 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim43bP86448 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim43bP86448 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Trim43bP86448 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43bP86448 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.99□□□□□ -0.49
Trim43bP86448 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms