Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Lsm6P62313 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Lsm6P62313 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Lsm6P62313 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.25□□□□□ -0.77
Lsm6P62313 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Lsm6P62313 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Lsm6P62313 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Lsm6P62313 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Lsm6P62313 Gm11663-201ENSMUST00000117888 290 ntBASIC10.24□□□□□ -0.77
Lsm6P62313 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Lsm6P62313 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.24□□□□□ -0.77
Lsm6P62313 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.24□□□□□ -0.77
Lsm6P62313 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.24□□□□□ -0.77
Lsm6P62313 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Lsm6P62313 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.24□□□□□ -0.77
Lsm6P62313 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Lsm6P62313 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Lsm6P62313 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lsm6P62313 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Lsm6P62313 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Lsm6P62313 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Lsm6P62313 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.23□□□□□ -0.77
Lsm6P62313 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Lsm6P62313 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.23□□□□□ -0.77
Lsm6P62313 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Lsm6P62313 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Lsm6P62313 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Gm14724-201ENSMUST00000118400 537 ntBASIC10.23□□□□□ -0.77
Lsm6P62313 Gm11439-201ENSMUST00000118598 409 ntBASIC10.23□□□□□ -0.77
Lsm6P62313 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.23□□□□□ -0.77
Lsm6P62313 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.23□□□□□ -0.77
Lsm6P62313 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Lsm6P62313 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.23□□□□□ -0.77
Lsm6P62313 Gm28686-201ENSMUST00000187404 609 ntBASIC10.23□□□□□ -0.77
Lsm6P62313 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.23□□□□□ -0.77
Lsm6P62313 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lsm6P62313 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms