Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Nup43P59235 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11□□□□□ -0.65
Nup43P59235 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Nup43P59235 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11□□□□□ -0.65
Nup43P59235 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11□□□□□ -0.65
Nup43P59235 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nup43P59235 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Nup43P59235 Gm12579-201ENSMUST00000118040 783 ntBASIC11□□□□□ -0.65
Nup43P59235 Gm6506-201ENSMUST00000119775 1136 ntBASIC11□□□□□ -0.65
Nup43P59235 Gm15566-201ENSMUST00000121130 590 ntBASIC11□□□□□ -0.65
Nup43P59235 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nup43P59235 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nup43P59235 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11□□□□□ -0.65
Nup43P59235 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11□□□□□ -0.65
Nup43P59235 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11□□□□□ -0.65
Nup43P59235 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11□□□□□ -0.65
Nup43P59235 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11□□□□□ -0.65
Nup43P59235 Gm29499-201ENSMUST00000189151 486 ntBASIC11□□□□□ -0.65
Nup43P59235 Gm28329-201ENSMUST00000191208 689 ntBASIC11□□□□□ -0.65
Nup43P59235 Gm29171-201ENSMUST00000191397 486 ntBASIC11□□□□□ -0.65
Nup43P59235 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nup43P59235 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11□□□□□ -0.65
Nup43P59235 Gm18065-201ENSMUST00000221395 526 ntBASIC11□□□□□ -0.65
Nup43P59235 CT009713.8-202ENSMUST00000224732 385 ntBASIC11□□□□□ -0.65
Nup43P59235 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Gm9785-201ENSMUST00000062642 1006 ntBASIC11□□□□□ -0.65
Nup43P59235 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nup43P59235 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Nup43P59235 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11□□□□□ -0.65
Nup43P59235 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nup43P59235 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11□□□□□ -0.65
Nup43P59235 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nup43P59235 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nup43P59235 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.99□□□□□ -0.65
Nup43P59235 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.99□□□□□ -0.65
Nup43P59235 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nup43P59235 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nup43P59235 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.99□□□□□ -0.65
Nup43P59235 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
Nup43P59235 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.99□□□□□ -0.65
Nup43P59235 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.99□□□□□ -0.65
Nup43P59235 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nup43P59235 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.99□□□□□ -0.65
Nup43P59235 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.99□□□□□ -0.65
Nup43P59235 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nup43P59235 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms