Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn2bP55271 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn2bP55271 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn2bP55271 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn2bP55271 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn2bP55271 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cdkn2bP55271 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
Cdkn2bP55271 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn2bP55271 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cdkn2bP55271 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn2bP55271 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn2bP55271 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.12□□□□□ -0.63
Cdkn2bP55271 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.12□□□□□ -0.63
Cdkn2bP55271 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.12□□□□□ -0.63
Cdkn2bP55271 Gm8062-201ENSMUST00000139696 444 ntBASIC11.12□□□□□ -0.63
Cdkn2bP55271 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Gm38117-201ENSMUST00000194653 939 ntBASIC11.12□□□□□ -0.63
Cdkn2bP55271 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Gm21769-201ENSMUST00000211922 111 ntBASIC11.12□□□□□ -0.63
Cdkn2bP55271 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.12□□□□□ -0.63
Cdkn2bP55271 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdkn2bP55271 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Btrc-209ENSMUST00000224478 2194 ntBASIC11.11□□□□□ -0.63
Cdkn2bP55271 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cdkn2bP55271 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Gm14071-201ENSMUST00000117817 509 ntBASIC11.11□□□□□ -0.63
Cdkn2bP55271 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Gm4310-201ENSMUST00000177847 889 ntBASIC11.11□□□□□ -0.63
Cdkn2bP55271 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Gm27572-201ENSMUST00000183702 255 ntBASIC11.11□□□□□ -0.63
Cdkn2bP55271 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.11□□□□□ -0.63
Cdkn2bP55271 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms