Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Gm10434-201ENSMUST00000101158 471 ntBASIC11.2□□□□□ -0.62
Prox1P48437 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.2□□□□□ -0.62
Prox1P48437 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.2□□□□□ -0.62
Prox1P48437 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.2□□□□□ -0.62
Prox1P48437 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Prox1P48437 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Olfr582-201ENSMUST00000098212 960 ntBASIC11.2□□□□□ -0.62
Prox1P48437 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.2□□□□□ -0.62
Prox1P48437 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.2□□□□□ -0.62
Prox1P48437 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.2□□□□□ -0.62
Prox1P48437 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.2□□□□□ -0.62
Prox1P48437 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.19□□□□□ -0.62
Prox1P48437 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.19□□□□□ -0.62
Prox1P48437 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.19□□□□□ -0.62
Prox1P48437 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Prox1P48437 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.19□□□□□ -0.62
Prox1P48437 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Gm28882-201ENSMUST00000185504 314 ntBASIC11.19□□□□□ -0.62
Prox1P48437 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.19□□□□□ -0.62
Prox1P48437 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.19□□□□□ -0.62
Prox1P48437 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.19□□□□□ -0.62
Prox1P48437 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.19□□□□□ -0.62
Prox1P48437 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.19□□□□□ -0.62
Prox1P48437 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Prox1P48437 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Prox1P48437 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.19□□□□□ -0.62
Prox1P48437 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.19□□□□□ -0.62
Prox1P48437 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.19□□□□□ -0.62
Prox1P48437 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Prox1P48437 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Prox1P48437 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Prox1P48437 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Prox1P48437 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Prox1P48437 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Prox1P48437 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Gm6023-201ENSMUST00000118217 606 ntBASIC11.18□□□□□ -0.62
Prox1P48437 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms