Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Pck2-205ENSMUST00000226352 2784 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Gm12579-201ENSMUST00000118040 783 ntBASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Gm22885-201ENSMUST00000157410 107 ntBASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Mir6979-201ENSMUST00000183927 56 ntBASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Gm6867-201ENSMUST00000219165 425 ntBASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Spcs1-203ENSMUST00000226374 592 ntBASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1bP25119 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm9062-201ENSMUST00000117712 727 ntBASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm15566-201ENSMUST00000121130 590 ntBASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm23699-201ENSMUST00000158835 135 ntBASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.8□□□□□ -0.68
Tnfrsf1bP25119 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms