Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Clk1P22518 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Clk1P22518 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clk1P22518 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clk1P22518 AC154171.3-201ENSMUST00000224519 2505 ntBASIC10.98□□□□□ -0.65
Clk1P22518 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clk1P22518 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.98□□□□□ -0.65
Clk1P22518 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clk1P22518 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clk1P22518 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Clk1P22518 Gfm2-208ENSMUST00000161639 3157 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clk1P22518 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Gm12576-201ENSMUST00000135268 3036 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
Clk1P22518 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Gm13296-201ENSMUST00000117854 997 ntBASIC10.97□□□□□ -0.65
Clk1P22518 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 AA914427-201ENSMUST00000193194 1166 ntBASIC10.97□□□□□ -0.65
Clk1P22518 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.97□□□□□ -0.65
Clk1P22518 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.97□□□□□ -0.65
Clk1P22518 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Clk1P22518 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Clk1P22518 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.97□□□□□ -0.65
Clk1P22518 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.97□□□□□ -0.65
Clk1P22518 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Clk1P22518 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Gm45769-201ENSMUST00000204588 1828 ntBASIC10.97□□□□□ -0.65
Clk1P22518 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.97□□□□□ -0.65
Clk1P22518 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clk1P22518 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Rims2-204ENSMUST00000226410 3685 ntBASIC10.96□□□□□ -0.65
Clk1P22518 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Clk1P22518 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC10.96□□□□□ -0.65
Clk1P22518 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Clk1P22518 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.96□□□□□ -0.65
Clk1P22518 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.96□□□□□ -0.65
Clk1P22518 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.96□□□□□ -0.65
Clk1P22518 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.96□□□□□ -0.65
Clk1P22518 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.96□□□□□ -0.65
Clk1P22518 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clk1P22518 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Clk1P22518 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clk1P22518 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Clk1P22518 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clk1P22518 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Clk1P22518 Gm37367-201ENSMUST00000191771 2602 ntBASIC10.96□□□□□ -0.66
Clk1P22518 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clk1P22518 AC117656.2-201ENSMUST00000224931 2215 ntBASIC10.96□□□□□ -0.66
Clk1P22518 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clk1P22518 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.96□□□□□ -0.66
Clk1P22518 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clk1P22518 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Clk1P22518 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Clk1P22518 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC10.96□□□□□ -0.66
Clk1P22518 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.96□□□□□ -0.66
Clk1P22518 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms