Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.21□□□□□ -0.61
BdnfP21237 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.21□□□□□ -0.61
BdnfP21237 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
BdnfP21237 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Gm11700-201ENSMUST00000119409 403 ntBASIC11.21□□□□□ -0.61
BdnfP21237 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.21□□□□□ -0.61
BdnfP21237 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.21□□□□□ -0.61
BdnfP21237 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.21□□□□□ -0.61
BdnfP21237 Gm27516-201ENSMUST00000184237 98 ntBASIC11.21□□□□□ -0.61
BdnfP21237 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Gm6334-201ENSMUST00000207083 228 ntBASIC11.21□□□□□ -0.61
BdnfP21237 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
BdnfP21237 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
BdnfP21237 Gm10312-201ENSMUST00000078515 489 ntBASIC11.21□□□□□ -0.61
BdnfP21237 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
BdnfP21237 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
BdnfP21237 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
BdnfP21237 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
BdnfP21237 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.21□□□□□ -0.62
BdnfP21237 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
BdnfP21237 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
BdnfP21237 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
BdnfP21237 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
BdnfP21237 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
BdnfP21237 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
BdnfP21237 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
BdnfP21237 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 CT009601.1-201ENSMUST00000225567 2705 ntBASIC11.2□□□□□ -0.62
BdnfP21237 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Gm23270-201ENSMUST00000104055 131 ntBASIC11.2□□□□□ -0.62
BdnfP21237 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.2□□□□□ -0.62
BdnfP21237 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.2□□□□□ -0.62
BdnfP21237 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
BdnfP21237 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.2□□□□□ -0.62
BdnfP21237 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.2□□□□□ -0.62
BdnfP21237 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Gm2991-201ENSMUST00000173338 480 ntBASIC11.2□□□□□ -0.62
BdnfP21237 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
BdnfP21237 Gm6621-201ENSMUST00000193251 772 ntBASIC11.2□□□□□ -0.62
BdnfP21237 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.2□□□□□ -0.62
BdnfP21237 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
BdnfP21237 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.2□□□□□ -0.62
BdnfP21237 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
BdnfP21237 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
BdnfP21237 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
BdnfP21237 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
BdnfP21237 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
BdnfP21237 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
BdnfP21237 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
BdnfP21237 Gm28581-201ENSMUST00000186086 2177 ntBASIC11.19□□□□□ -0.62
BdnfP21237 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
BdnfP21237 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
BdnfP21237 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
BdnfP21237 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
BdnfP21237 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
BdnfP21237 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
BdnfP21237 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
BdnfP21237 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.19□□□□□ -0.62
BdnfP21237 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.19□□□□□ -0.62
BdnfP21237 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
BdnfP21237 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms