Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Gm25890-201ENSMUST00000177643 165 ntBASIC10.36□□□□□ -0.75
OtpO09113 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.36□□□□□ -0.75
OtpO09113 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.36□□□□□ -0.75
OtpO09113 Gm22614-201ENSMUST00000178300 165 ntBASIC10.36□□□□□ -0.75
OtpO09113 Gm28686-201ENSMUST00000187404 609 ntBASIC10.36□□□□□ -0.75
OtpO09113 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
OtpO09113 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.36□□□□□ -0.75
OtpO09113 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
OtpO09113 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
OtpO09113 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
OtpO09113 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
OtpO09113 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.36□□□□□ -0.75
OtpO09113 Gm22042-201ENSMUST00000082989 165 ntBASIC10.36□□□□□ -0.75
OtpO09113 Gm26110-201ENSMUST00000083971 165 ntBASIC10.36□□□□□ -0.75
OtpO09113 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
OtpO09113 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
OtpO09113 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
OtpO09113 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
OtpO09113 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
OtpO09113 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.36□□□□□ -0.75
OtpO09113 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
OtpO09113 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
OtpO09113 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
OtpO09113 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
OtpO09113 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
OtpO09113 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
OtpO09113 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.36□□□□□ -0.75
OtpO09113 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.36□□□□□ -0.75
OtpO09113 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
OtpO09113 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.35□□□□□ -0.75
OtpO09113 Gm26361-201ENSMUST00000158868 186 ntBASIC10.35□□□□□ -0.75
OtpO09113 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
OtpO09113 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
OtpO09113 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.35□□□□□ -0.75
OtpO09113 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Gm13097-201ENSMUST00000210722 397 ntBASIC10.35□□□□□ -0.75
OtpO09113 Gm9797-202ENSMUST00000218003 294 ntBASIC10.35□□□□□ -0.75
OtpO09113 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.35□□□□□ -0.75
OtpO09113 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.35□□□□□ -0.75
OtpO09113 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
OtpO09113 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
OtpO09113 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
OtpO09113 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.34□□□□□ -0.75
OtpO09113 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.34□□□□□ -0.75
OtpO09113 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
OtpO09113 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.34□□□□□ -0.75
OtpO09113 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.34□□□□□ -0.75
OtpO09113 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.34□□□□□ -0.75
OtpO09113 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.34□□□□□ -0.75
OtpO09113 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Gm11511-201ENSMUST00000118146 540 ntBASIC10.34□□□□□ -0.75
OtpO09113 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
OtpO09113 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.34□□□□□ -0.75
OtpO09113 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.34□□□□□ -0.75
OtpO09113 Gm6114-201ENSMUST00000182472 968 ntBASIC10.34□□□□□ -0.75
OtpO09113 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.34□□□□□ -0.75
OtpO09113 Gm38241-201ENSMUST00000192641 898 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms