Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Mir7677-201ENSMUST00000184226 67 ntBASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Gm19287-201ENSMUST00000203190 358 ntBASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Gm270-201ENSMUST00000223010 976 ntBASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Gm5705-201ENSMUST00000066241 711 ntBASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Mir433-201ENSMUST00000093564 124 ntBASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.35
Prpf40aQ9R1C7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.9□□□□□ -0.35
Prpf40aQ9R1C7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.9□□□□□ -0.35
Prpf40aQ9R1C7 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Gm14201-201ENSMUST00000117627 289 ntBASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Gm2260-201ENSMUST00000184965 657 ntBASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Gm18730-201ENSMUST00000218038 343 ntBASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.89□□□□□ -0.35
Prpf40aQ9R1C7 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Gm23949-201ENSMUST00000104027 127 ntBASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Gm14539-201ENSMUST00000117527 174 ntBASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Gm28745-201ENSMUST00000190069 305 ntBASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Gm38188-201ENSMUST00000192879 856 ntBASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC12.88□□□□□ -0.35
Prpf40aQ9R1C7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms