Protein–RNA interactions for Protein: Q9QZD4

Ercc4, DNA repair endonuclease XPF, mousemouse

Predictions only

Length 917 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4Q9QZD4 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ercc4Q9QZD4 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.64□□□□□ -0.39
Ercc4Q9QZD4 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Ercc4Q9QZD4 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ercc4Q9QZD4 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ercc4Q9QZD4 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Rprl1-202ENSMUST00000198476 238 ntBASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Gm43822-201ENSMUST00000200285 476 ntBASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ercc4Q9QZD4 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Gm32999-201ENSMUST00000192693 562 ntBASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Gm44364-201ENSMUST00000198368 141 ntBASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Gm43179-201ENSMUST00000198797 275 ntBASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Gm44967-201ENSMUST00000207047 631 ntBASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ercc4Q9QZD4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms